BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C06SP1|AL424933
(739 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig693 1364 0.0
>3x_Contig693
Length = 3563
Score = 1364 bits (678), Expect = 0.0
Identities = 718/739 (97%), Gaps = 2/739 (0%)
Strand = Plus / Minus
Query: 1 actcccaagaccggagaaacttggtctcytgatgtgcggagaatcgatgtagtagatgag 60
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 2842 actcccaagaccggagaaacttggtcacctgatgtgcggagaatcgatgtagtagatgag 2783
Query: 61 cacgatggtttgattggtgttwtgtactgtgatttwtttgwwagagagggcaagacccca 120
||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||
Sbjct: 2782 cacgatggtttgattggtgttatgtactgtgatttatttgaaagagagggcaagacccca 2723
Query: 121 aatccggctcatttcwcggtatgttgttcaagaaacatgtttctaaatgaggcagacact 180
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2722 aatccggctcatttcacggtatgttgttcaagaaacatgtatctaaatgaggcagacact 2663
Query: 181 tcaacaattcaggtgggcgttaatagcaacggccaaanattccagttacctgtcatttca 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2662 tcaacaattcaggtgggcgttaatagcaacggccaaaaattccagttacctgtcatttca 2603
Query: 241 cttgtatgtgacttccgatgggttgawgtcwatatgggcgatgggaaacaccaacaawtg 300
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||
Sbjct: 2602 cttgtatgtgacttccgatgggttgaagtcaatatgggcgatgggaaacaccaacaaatg 2543
Query: 301 tgtctcttgcaattgaatgagattgavactttwttccatgagatgggacatgcaatgcac 360
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 2542 tgtctcttgcaattgaatgagattgaaactttattccatgagatgggacatgcaatgcac 2483
Query: 361 tcaatgttgggaagaactcaattacaaaatgtcagcgggwctcgttgtgccactgatttt 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2482 tcaatgttgggaagaactcaattacaaaatgtcagcgggactcgttgtgccactgatttt 2423
Query: 421 gttgaattacctagtattttwatggaacattttgcccgtgacaccagagttctatcatcc 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2422 gttgaattacctagtattttaatggaacattttgcccgtgacaccagagttctatcatcc 2363
Query: 481 atttcatcacattacaagactggtaaatcattggacgtcgaagtgttgaagaatcatcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2362 atttcatcacattacaagactggtaaatcattggacgtcgaagtgttgaagaatcatcaa 2303
Query: 541 ttggaaaaccagtttttacagaactgtg-aamgttctcccaaatcaagatgtcattctta 599
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 2302 ttggaaaaccagtttttacagaactgtgaaacgttctcccaaatcaagatgtcattctta 2243
Query: 600 ga-tcaagaattgcacaacttggatcacaccacakatggttctatcgatgtaattgctat 658
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2242 gattcaagaattgcacaacttggatcacaccacagatggttctatcgatgtaattgctat 2183
Query: 659 ctatcacagattagaacgtcgtctagcagtattaccagatgatcagagcaactggtgtgg 718
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2182 ctatcacagattagaacgtcgtctagcagtattaccagatgttcagagcaactggtgtgg 2123
Query: 719 taaatttggtcatcttttt 737
|||||||||||||||||||
Sbjct: 2122 taaatttggtcatcttttt 2104
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4540
Number of Sequences: 1807
Number of extensions: 4540
Number of successful extensions: 102
Number of sequences better than 1.0e-20: 1
length of query: 739
length of database: 10,358,551
effective HSP length: 16
effective length of query: 723
effective length of database: 10,329,639
effective search space: 7468328997
effective search space used: 7468328997
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)